PUBLICATIONS & PRESENTATIONS

Medical Ontology Research - Drug-related Publications

2019

  • Bodenreider O, Nikiema J-N.
    Comparing the representation of medicinal products in RxNorm and SNOMED CT – Consequences on interoperability. [abstract]
    SNOMED CT Expo 2019:(https://confluence.ihtsdotools.org/pages/viewpage.action?pageId=87042679).
     [download PDF]  

  • Kho SJ, Sheth A, Bodenreider O.
    Automatic identification of individual drugs in death certificates.
    Stud Health Technol Inform (Proc Medinfo) 2019;21(264):183-187.
     [download PDF]   [PubMed: 31437910]  

  • Nikiema J-N, Bodenreider O.
    Comparing the representation of medicinal products in RxNorm and SNOMED CT – Consequences on interoperability.
    Proceedings of the 10th International Conference on Biomedical Ontology (ICBO 2019) 2019:(electronic proceedings: https://drive.google.com/file/d/1ZTDH-vWUvCqBCyOPY5f97L6L7fb4HRWA/).
     [download PDF]  

  • Vasilakes J, Fan Y, Rizvi R, Bompelli A, Zhang R, Bodenreider O.
    Normalizing dietary supplement product names using the RxNorm model.
    Stud Health Technol Inform (Proc Medinfo) 2019;21(264):408-412.
     [download PDF]   [PubMed: 31437955]   [PubMedCentral: PMC6792000]  

2018

  • Bodenreider O, Cornet R, Vreeman DJ.
    Recent developments in clinical terminologies – SNOMED CT, LOINC and RxNorm.
    Yearb Med Inform 2018;27(1):129-139.
     [download PDF]   [PubMed: 30157516]   [PubMedCentral: PMC6115234]  

  • Bodenreider O, James J.
    The new SNOMED CT international medicinal product model.
    Proceedings of the 7th International Conference on Biomedical Ontology (ICBO 2018) 2018:(electronic proceedings: http://ceur-ws.org/Vol-2285/ICBO_2018_paper_36.pdf).
     [download PDF]  

  • Bodenreider O, Peters LB.
    Using RxNav for drug analytics – How to interpret obsolete drug identifiers? [demo]
    AMIA Annu Symp Proc 2018:2229.
     [download PDF]  

  • Pedersen JG, Gardner B, Campbell JR, Campbell WS, Geary C, Peters L, Bodenreider O, McClay JC.
    Historically comprehensive medications metadata for i2b2 data warehouses. [abstract]
    AMIA Annu Symp Proc 2018:1806-1807.
     [download PDF]  

  • Peters LB, Rice R, Bodenreider O.
    RxNav-in-a-Box – A locally-installable version of RxNav and related APIs. [poster]
    AMIA Annu Symp Proc 2018:2102.
     [download PDF]  

2017

  • Bahr NJ, Nelson SD, Winnenburg R, Bodenreider O.
    Eliciting the intension of drug value sets – Principles and quality assurance applications.
    Stud Health Technol Inform (Proc Medinfo) 2017:843-847.
     [download PDF]   [PubMed: 29295218]   [PubMedCentral: PMC5881398]  

  • Bodenreider O, Peters LB.
    RxNorm concept history service. [poster]
    AMIA Annu Symp Proc 2017:1955.
     [download PDF]  

  • Bodenreider O, Peters LB.
    RxMix – Use of NLM drug APIs by non-programmers. [demo]
    AMIA Annu Symp Proc 2017:2291.
     [download PDF]  

  • Fung KW, Kapusnik-Uner JE, Cunningham J, Higby-Baker S, Bodenreider O.
    Comparison of three commercial knowledge bases for detection of drug-drug interactions in clinical decision support.
    J Am Med Inform Assoc 2017;24(4):806-812.
     [download PDF]   [PubMed: 28339701]   [PubMedCentral: PMC6080681]  

  • Kury FSP, Bodenreider O.
    Mapping U.S. FDA National Drug Codes to Anatomical-Therapeutic-Chemical classes using RxNorm. [poster]
    AMIA Annu Symp Proc 2017:2070.
     [download PDF]  

  • Nelson SD, Parker J, Lario R, Winnenburg R, Erlbaum MS, Lincoln MJ, Bodenreider O.
    Interoperability of medication classification systems: Lessons learned mapping established pharmacologic classes (EPCs) to SNOMED CT.
    Stud Health Technol Inform (Proc Medinfo) 2017:920-924.
     [download PDF]   [PubMed: 29295234]   [PubMedCentral: PMC5881380]  

  • Peters LB, Bodenreider O.
    RxNav 2.0 – A web-based, mobile-responsive RxNorm browser. [poster]
    AMIA Annu Symp Proc 2017:2143.
     [download PDF]  

  • Peters LB, Nguyen T, Bodenreider O.
    Terminology status APIs – Mapping obsolete codes to current RxNorm, SNOMED CT and LOINC concepts. [poster]
    Stud Health Technol Inform (Proc Medinfo) 2017:1333.
     [download PDF]   [PubMed: 29295414]   [PubMedCentral: PMC5875440]  

2016

  • Bodenreider O.
    Leveraging RxNorm and drug classifications for analyzing prescription datasets. [abstract]
    Symposium on "Chemistry, Data, & the Semantic Web: An Important Triple to Advance Science” at the 251st American Chemical Society National Meeting & Exposition 2016:(no proceedings).
     [download PDF]  

  • Dhombres F, Bodenreider O.
    Assessing the potential risk in drug prescriptions during pregnancy. [abstract]
    AMIA Annu Symp Proc 2016:45-46.
     [download PDF]  

  • Homer ML, Palmer NP, Bodenreider O, Cami A, Chadwick L, Mandl KD.
    The drug data to knowledge pipeline: Large-scale claims data classification for pharmacologic insight.
    AMIA Jt Summits Transl Sci Proc 2016;CRI:105-110.
     [download PDF]   [PubMed: 27570659]   [PubMedCentral: PMC5001754]  

  • Kury FSP, Bodenreider O.
    Desiderata for drug classification systems for their use in analyzing large drug prescription datasets.
    Proceedings of the 3rd Workshop on Data Mining for Medical Informatics (DMMI 2016) 2016.
     [download PDF]  

  • Peters LB, Bodenreider O.
    NDC properties in RxNorm. [poster]
    AMIA Annu Symp Proc 2016:1551.
     [download PDF]  

2015

2014

  • Bodenreider O, Peters LB, Nguyen T.
    RxClass – Navigating between Drug Classes and RxNorm Drugs. [demo]
    Proceedings of the 5th International Conference on Biomedical Ontology 2014:106-107 (electronic proceedings: http://ceur-ws.org/Vol-1327/).
     [download PDF]  

  • Bodenreider O, Rodriguez LM.
    Analyzing U.S. prescription lists with RxNorm and the ATC/DDD Index.
    AMIA Annu Symp Proc 2014:297-306.
     [download PDF]   [PubMed: 25954332]   [PubMedCentral: PMC4419961]  

  • Nguyen T, Peters LB, Bodenreider O.
    RxClass - Navigating between drug classes and RxNorm drugs. [poster]
    AMIA Annu Symp Proc 2014:1529.
     [download PDF]  

  • Rodriguez LM, Huser V, Bodenreider O, Cimino JJ.
    Automatic coding of free-text medication data recorded by research coordinators. [poster]
    AMIA Annu Symp Proc 2014:1565.
     [download PDF]  

  • Winnenburg R, Bodenreider O.
    A framework for assessing the consistency of pharmacological classes across sources.
    J Biomed Semantics 2014;5(30).
     [download PDF]   [PubMed: 25101165]   [PubMedCentral: PMC4120719]  

  • Winnenburg R, Bodenreider O.
    Evaluating the consistency of inferred drug-class membership relations in NDF-RT.
    Proceedings of the 17th ISMB'2014 SIG meeting "Bio-Ontologies" 2014:(electronic proceedings: https://drive.google.com/file/d/0B6AZUdKw1IVHeGVtTVZCRXJhbFk/).
     [download PDF]  

2013

  • Peters LB, Mortensen J, Nguyen T, Bodenreider O.
    Enabling complex queries to drug information sources through functional composition.
    Stud Health Technol Inform (Proc Medinfo) 2013;192:692-696.
     [download PDF]   [PubMed: 23920645]   [PubMedCentral: PMC4303373]  

  • Peters LB, Nguyen T, Bodenreider O.
    Displaying drug classes in RxNav. [poster]
    AMIA Annu Symp Proc 2013:1134.
     [download PDF]  

  • Winnenburg R, Rodriguez LM, Callaghan F, Sorbello A, Szarfman A, Bodenreider O.
    Aligning pharmacologic classes between MeSH and ATC.
    Proceedings of the International Workshop on Vaccine and Drug Ontology Studies (VDOS 2013) 2013:(electronic proceedings: http://www2.unb.ca/csas/data/ws/semantic-trilogy-workshops/papers/ICBO-Workshops.pdf).
     [download PDF]  

2012

  • Peters LB, Nguyen T, Bodenreider O.
    RxBatch – Batch operations for RxNorm and NDF-RT APIs. [poster]
    AMIA Annu Symp Proc 2012:1897.
     [download PDF]  

  • Winnenburg R, Bodenreider O.
    Mapping drug entities between the European and American standards, ATC and RxNorm. [poster]
    Poster Proceedings of the Eighth International Conference on Data Integration in the Life Sciences (DILS 2012) 2012:22.
     [download PDF]  

2011

  • Bodenreider O, Peters LB, Nguyen T.
    RxNav: Browser and application programming interfaces for drug information sources. [demo]
    AMIA Annu Symp Proc 2011:2129.
     [download PDF]  

  • Peters LB, Kapusnik-Uner JE, Nguyen T, Bodenreider O.
    An approximate matching method for clinical drug names.
    AMIA Annu Symp Proc 2011:1117-1126.
     [download PDF]   [PubMed: 22195172]   [PubMedCentral: PMC3243188]  

  • Peters LB, Nguyen T, Bodenreider O.
    An application programming interface for NDF-RT. [poster]
    AMIA Annu Symp Proc 2011:1922.
     [download PDF]  

2010

2009

2008

2007

  • Zeng K, Bodenreider O, Kilbourne JT, Nelson SJ.
    RxNav: Towards an integrated view on drug information. [poster]
    Medinfo 2007:P386.
     [download PDF]  

  • Zeng K, Bodenreider O, Kilbourne JT, Nelson SJ.
    RxNav: An integrated view on drug information. [demo]
    AMIA Annu Symp Proc 2007:1202.
     [download PDF]  

2006

2005

2004

  • Bodenreider O, Nelson SJ.
    RxNav: A semantic navigation tool for clinical drugs. [poster]
    Medinfo 2004:1530.
     [download PDF]